Jeff,
Where the floor pan meets the frame rail, spot weld across the top of floor pan along both sides of the rail. This will ensure that you have no gap between the framerail and the floor pan. Once this is done you may want to seam weld from below. (Although this was not done oringinally)
After that butt weld the rest of the panel into the correct place.
A couple of tips in regards to this panel:-
If you got your floor pan from KK (And its thinner that the other panels) panel warping may be an issue (did'nt have this happen on any other panel). Tack weld the corners and around the bend on the trans tunnel.
Good Luck
Kay