Marcus,
the fact that you have 12 wires and only two doubled up is even more strange.
Take a look at the wiring diagram that Achim created - most likely for a Euro version 1966 230SL, but we need to ask him.
You should have 14 wires on the left part of the handshake connector and 12 wires on the other side. If the wiring diagram is correct then that should be the rear part of the harness but you should check that. All 12 slots (or holes) should be filled in both halves of the handshake connector according to the diagram.
To me and my very limited knowledge of electricals it makes little sense that the trunk light and the tail light (left or right?) are doubled up as you indicate!?
Also this wiring diagram does not tell us how the later additional emergency flasher was wired in. Lets hope someone has an answer to this.
BTW, my numbering does not coincide with your numbering of the slots/holes; I just went down the schematic.
I have an interest in this since I am also chasing a wiring problem in my 1964 230SL.